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Series GSE101565 Query DataSets for GSE101565
Status Public on Jul 19, 2017
Title The role of histone demethylase KDM5C in super-enhancer activation
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the SubSeries listed below
 
Overall design Examination of 3 different histone modifications in CaSki-Vector and CaSki-KDM5C cells
 
Contributor(s) Li F, Chen X
Citation(s) 29339538
Submission date Jul 18, 2017
Last update date Jul 25, 2021
Contact name xiaohua chen
E-mail(s) [email protected]
Organization name wuhan university
Department medical genetics
Lab LiFeng
Street address donghu road 185
City wuhan
ZIP/Postal code 430071
Country China
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (12)
GSM2706137 KDM5C_H3K4me1_ChIPSeq
GSM2706138 KDM5C_H3K4me3_ChIPSeq
GSM2706139 KDM5C_H3K27Ac_ChIPSeq
Relations
BioProject PRJNA394840
SRA SRP112709

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE101565_RAW.tar 1.4 Gb (http)(custom) TAR (of BW)
GSE101565_RNAseq_FPKM.txt.gz 1.5 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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