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Series GSE101744

Query DataSets for GSE101744

Status

Public on May 15, 2018

Title

Cdc6-2 functions as a master regulator in mediating DNA damage response

Organism

Sulfolobus islandicus

Experiment type

Expression profiling by high throughput sequencing

Summary

Transcriptome sequencing was carried out with an Illumina HiSeq platform to investigate the differently expressed genes in wild type strain E233S1 and cdc6-2 deletion mutant ∆cdc6-2 with or without 2 µM NQO treatment for 6 hours

Overall design

Examination of different gene expression in E233S1 and ∆cdc6-2 with or without NQO treatment

Contributor(s)

Sun M, She Q

Citation(s)

29878182, 38658536

Submission date

Jul 21, 2017

Last update date

May 17, 2024

Contact name

Mengmeng Sun

E-mail(s)

[email protected]

Organization name

copenhagen university

Street address

Ole Maaløes Vej 5

City

Copenhagen N

ZIP/Postal code

2200

Country

Denmark

Platforms (1)

GPL23820

Illumina HiSeq 2500 (Sulfolobus islandicus)

Samples (4)

More...

GSM2714332	E233S
GSM2714333	E233S_6N
GSM2714334	cdc6_2

Relations

BioProject

PRJNA395338

SRA

SRP113300

Download family	Format
SOFT formatted family file(s)	SOFT
MINiML formatted family file(s)	MINiML
Series Matrix File(s)	TXT

Supplementary file	Size	Download	File type/resource
GSE101744_E233S_6NvsE233S.DEG_down.xls.gz	12.9 Kb	(ftp)(http)	XLS
GSE101744_E233S_6NvsE233S.DEG_up.xls.gz	10.7 Kb	(ftp)(http)	XLS
GSE101744_Union_for_cluster.xls.gz	31.5 Kb	(ftp)(http)	XLS
GSE101744_cdc62_6NvsE233S_6N.DEG_down.xls.gz	8.5 Kb	(ftp)(http)	XLS
GSE101744_cdc62_6NvsE233S_6N.DEG_up.xls.gz	9.6 Kb	(ftp)(http)	XLS
GSE101744_cdc62_6Nvscdc6_2.DEG_down.xls.gz	1.1 Kb	(ftp)(http)	XLS
GSE101744_cdc62_6Nvscdc6_2.DEG_up.xls.gz	535 b	(ftp)(http)	XLS
GSE101744_cdc6_2vsE233S.DEG_down.xls.gz	7.4 Kb	(ftp)(http)	XLS
GSE101744_cdc6_2vsE233S.DEG_up.xls.gz	8.1 Kb	(ftp)(http)	XLS
GSE101744_fpkm.xls.gz	142.1 Kb	(ftp)(http)	XLS
GSE101744_readcount.xls.gz	67.6 Kb	(ftp)(http)	XLS
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Processed data are available on Series record