|
| Status |
Public on Jul 30, 2018 |
| Title |
Metabolic and Expression Regulation by the rex Gene in Caldicellulosiruptor bescii |
| Organism |
Caldicellulosiruptor bescii |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Metabolic and Expression Regulation by the rex Gene in Caldicellulosiruptor bescii
|
| |
|
| Overall design |
A total of 18 samples were analyzed. Each sample was sequenced on two different sequencing lanes, generating two sequence read files for each sample. A knockout strain (delta_rex) and its parent strain (JWCB005) were each grown in three relicate fermenters and sampled at three different time points throughout batch growth; early, mid and late log phase.
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| |
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| Contributor(s) |
Sander K, Chung D, Hyatt D, Westpheling J, Klingeman D, Rodriguez M, Davison B, Brown SD |
| Citation(s) |
29797457 |
| |
| Submission date |
Jul 30, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Kyle Sander |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Tennessee/Oak Ridge National Laboratory
|
| Department |
Biosciences
|
| Lab |
Dr. Steven Brown
|
| Street address |
1 Bethel Valley Road, MS 6038
|
| City |
Oak Ridge |
| State/province |
TN |
| ZIP/Postal code |
37830 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL23843 |
Illumina HiSeq 2500 (Caldicellulosiruptor bescii) |
|
| Samples (18)
|
|
| Relations |
| BioProject |
PRJNA396455 |
| SRA |
SRP114322 |
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