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Series GSE10740 Query DataSets for GSE10740
Status Public on Mar 06, 2008
Title Expression data from the colon of wild-type and Slc9a3 (NHE3)-deficient mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary Na+/H+ exchanger 3 (NHE3) provides a major route for intestinal Na+ absorption. It has been considered as a target of proinflammatory cytokines and enteropathogenic bacteria and impaired NHE3 expression and/or activity may be responsible for inflammation-associated diarrhea.
We used microarray analysis to detail the global programme of colonic gene expression in the absence of functional NHE3.
Keywords: knockout effect
 
Overall design Whole colon was dissected from 6-8 week old NHE3-deficient mice and their wild-type littermates and total RNA isolated for microarray analysis using Affymetrix murine MOE430 2.0 arrays
 
Contributor(s) Kiela PR, Ghishan FK
Citation(s) 18467500
Submission date Mar 05, 2008
Last update date Feb 11, 2019
Contact name Pawel R. Kiela
E-mail(s) [email protected]
Phone 520-626-9687
Organization name University of Arizona
Department Pediatrics
Lab Gastroenterology and Nutrition
Street address 1501 N. Campbell Ave.
City Tucson
State/province AZ
ZIP/Postal code 85724
Country USA
 
Platforms (1)
GPL1261 [Mouse430_2] Affymetrix Mouse Genome 430 2.0 Array
Samples (6)
GSM271147 NHE3+/+ replicate 1
GSM271148 NHE3+/+ replicate 2
GSM271149 NHE3+/+ replicate 3
Relations
BioProject PRJNA107513

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE10740_RAW.tar 20.2 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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