NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE107784 Query DataSets for GSE107784
Status Public on Apr 20, 2018
Title mitoCPR - a surveillance pathway that protects mitochondria in response to mitochondrial import stress
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Summary Mitochondrial functions are essential for cell viability and rely on protein import into the organelle. Various disease and stress conditions can lead to mitochondrial import defects. We find that inhibition of mitochondrial import in budding yeast activates a surveillance mechanism, mitoCPR, that is aimed at ameliorating mitochondrial import and protecting mitochondria during import stress. mitoCPR induces expression of Cis1 which associates with the mitochondrial translocase to reduce the accumulation of mitochondrial precursor proteins at the organelle surface. Clearance of precursor proteins depends on the Cis1 interacting AAA+ ATPase Msp1 and the proteasome suggesting that Cis1 facilitates degradation of un-imported proteins at the mitochondrial surface.
 
Overall design Five replicates of Empty Vector controls, six replicates of PSD1 overexpressors, six replicates of PSD1 overexpressors harboring a PDR3 deletion and five replicates of V5-PSD1 overexpressors.
 
Contributor(s) Weidberg H, Amon A
Citation(s) 29650645
Submission date Dec 06, 2017
Last update date May 15, 2019
Contact name Charles Arthur Whittaker
E-mail(s) [email protected]
Organization name Koch Institute
Street address 77 Mass Ave 76-189
City Cambridge
State/province MA
ZIP/Postal code 02152
Country USA
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (22)
GSM2879103 Empty_rep1
GSM2879104 Empty_rep2
GSM2879105 Empty_rep3
Relations
BioProject PRJNA421360
SRA SRP126291

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE107784_weidberg_counts.txt.gz 294.8 Kb (ftp)(http) TXT
GSE107784_weidberg_l2fpkm.txt.gz 696.0 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap