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Series GSE118247 Query DataSets for GSE118247
Status Public on Jan 22, 2020
Title Selective Inhibition of the Second Bromodomain of BET Family Maintains Anti-Tumor Efficacy and Improves Tolerability
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Here we report the discovery of ABBV-744, a first in class, highly potent and selective inhibitor of BET family BD2 domains with drug like properties. ChIP-seq analysis revealed that ABBV-744 displaced BRD4 from AR-containing super enhancers and elicited potent inhibition of AR-dependent transcription without causing broad transcription alterations associated with exposure to pan BET inhibitors.
 
Overall design BRD4 ChIP-Seq under four different treatment conditions in two cell lines. H3K27Ac ChIP-Seq from two cell lines, vehicle treatment only. AR ChIP-Seq in one cell line (LNCaP) with three treatment conditions. BRD4 and AR ChIP-Seq were all spike-in controlled.
 
Contributor(s) Faivre E, Plotnik J
Citation(s) 31969702
Submission date Aug 07, 2018
Last update date Feb 19, 2020
Contact name Josh Plotnik
E-mail(s) [email protected]
Organization name AbbVie Inc.
Street address 1 North Waukegan Rd, AP10/210A
City North Chicago
State/province IL
ZIP/Postal code 60064
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (14)
GSM3323535 LNCaP-DHT-DMSO_BRD4
GSM3323536 LNCaP-DHT-ABBV-075_BRD4
GSM3323537 LNCaP-DHT-ABBV-744_BRD4
Relations
BioProject PRJNA484953
SRA SRP156578

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE118247_RAW.tar 1.6 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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