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Series GSE121555 Query DataSets for GSE121555
Status Public on Oct 23, 2018
Title RNASeq analysis of untreated versus treated
Organisms Staphylococcus aureus; Streptococcus pyogenes; Enterococcus faecium
Experiment type Expression profiling by high throughput sequencing
Summary We report differential regulated genes in three pathogenic bacterial strains after treatment with a new antimicrobial.
 
Overall design Bacteria were grown in triplicates to mid-log phase in the presence or anbsence of PBT2+zinc and RNA was isolated for RNASeq analysis.
 
Contributor(s) Walker M, Bohlmann L
Citation(s) 30538186
Submission date Oct 22, 2018
Last update date Jan 09, 2019
Contact name Lisa Bohlmann
E-mail(s) [email protected]
Organization name University of Queensland
Street address University of Queensland
City St. Lucia
ZIP/Postal code 4072
Country Australia
 
Platforms (3)
GPL19006 Illumina HiSeq 2500 (Staphylococcus aureus)
GPL20656 Illumina HiSeq 2500 (Streptococcus pyogenes)
GPL23589 Illumina HiSeq 2500 (Enterococcus faecium)
Samples (18)
GSM3439171 GAS untreated [28]
GSM3439172 GAS untreated [29]
GSM3439173 GAS untreated [30]
Relations
BioProject PRJNA497790
SRA SRP166268

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121555_HKU.xlsx.gz 342.1 Kb (ftp)(http) XLSX
GSE121555_MRSA.xlsx.gz 458.9 Kb (ftp)(http) XLSX
GSE121555_VRE.xlsx.gz 2.5 Mb (ftp)(http) XLSX
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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