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Series GSE121910 Query DataSets for GSE121910
Status Public on Oct 30, 2018
Title Differential analysis of salivary microRNA profiles in healthy and chronic periodontitis patients using Next Generation sequencing technology.
Organism Homo sapiens
Experiment type Non-coding RNA profiling by high throughput sequencing
Summary We report the application of high throughput Illumina sequencing for profiling of small RNAs in saliva of patients who were diagnosed with chronic periodontitis as compared to healthy controls. To date, there is no published literature on salivary microRNA profiling done using the high throughput next-generation sequencing analysis in patients diagnosed with chronic periodontitis. Also, this is the first study of its kind done in an Indian population. The objectives of the study were to profile microRNAs expressed in saliva of patients diagnosed with chronic periodontitis, to identify differentially expressed microRNAs between chronic periodontitis and healthy patients and to identify putative salivary microRNAs which can serve as biomarkers for periodontal disease.
 
Overall design Comparative analysis of microRNA profile in saliva of healthy and chronic periodontitis patients.
 
Contributor(s) Nisha KJ, Janam P, Harshakumar K
Citation(s) 31021403
Submission date Oct 29, 2018
Last update date May 12, 2019
Contact name Nisha K.J
E-mail(s) [email protected]
Organization name Vydehi Institute of Dental sciences and Research Centre
Department Department of Periodontics
Street address EPIP Zone, Whitefield
City Bangalore
State/province Karnataka
ZIP/Postal code 560066
Country India
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (2)
GSM3449800 Control (miRNA-seq)
GSM3449801 Case (miRNA-seq)
Relations
BioProject PRJNA499042
SRA SRP167103

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE121910_Known-miRNA-Case-vs-Control.txt.gz 3.1 Kb (ftp)(http) TXT
GSE121910_miRNA-Expression.txt.gz 3.7 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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