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Series GSE122987 Query DataSets for GSE122987
Status Public on Nov 28, 2018
Title Transcriptome analysis of PPN1 knock-out and overproducing yeast strains grown in control and manganese excess media
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Summary We report RNA-Seq data of S.cerevisiae PPN1 knock-out yeast strain and PPN1 overproducing transformant yeast strain grown to logarithmic stage in control medium and in the medium containing 5mM manganese.
 
Overall design Yeast were grown to logarithmic growth stage in control YPD medium and in YPD medium with 5 mM MnSO4.
 
Contributor(s) Kulakovskaya TV, Penin AA, Kulakovskiy IV
Citation(s) 31096715
Submission date Nov 27, 2018
Last update date Jun 24, 2019
Contact name Ivan V Kulakovskiy
Organization name Institute of Protein Research
Street address Institutskaya 4
City Pushchino
ZIP/Postal code 142290
Country Russia
 
Platforms (1)
GPL13821 Illumina HiSeq 2000 (Saccharomyces cerevisiae)
Samples (8)
GSM3489931 CRN_ctr_r1
GSM3489932 CRN_ctr_r2
GSM3489933 CRN_Mn_r1
Relations
BioProject PRJNA507158
SRA SRP170930

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE122987_RAW.tar 390.0 Kb (http)(custom) TAR (of TSV)
GSE122987_genecounts.tsv.gz 584.5 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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