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Series GSE124754 Query DataSets for GSE124754
Status Public on Apr 14, 2020
Title mTORC1 feedback to AKT modulates MiT/TFE-driven lysosomal biogenesis and EGFR degradation
Organism Mus musculus
Experiment type Expression profiling by array
Summary MiT/TFE transcriptional activity controls lysosomal biogenesis and is negatively regulated by the nutrient sensor mTORC1. Some tumors bypass this regulatory circuit via genetic alterations that drive MiT/TFE expression and activity; however, the mechanisms by which cells with intact or constitutive mTORC1 signaling maintain lysosomal catabolism remain to be elucidated. Using the murine epidermis as a model system, we find that epidermal Tsc1 deletion results in a wavy hair phenotype due to increased EGFR degradation. Unexpectedly, constitutive mTORC1 activation increases lysosomal content via up-regulated expression and activity of MiT/TFEs, while genetic or prolonged pharmacologic mTORC1 inactivation has the reverse effect. This paradoxical up-regulation of lysosomal biogenesis by mTORC1 is mediated by feedback inhibition of AKT, and a resulting suppression of AKT-induced MiT/TFE proteasomal degradation. These data suggest that oncogenic feedback loops work to restrain or maintain cellular lysosomal content during chronically inhibited or constitutively active mTORC1 signaling respectively, and reveal a mechanism by which mTORC1 regulates upstream receptor tyrosine kinase signaling.
 
Overall design We performed microarray-based differential expression analysis of E18.5 epidermis from wild-type (3 biological replicates) and Rptor cKO (3 biological replicates) epidermal RNA samples and performed Gene Set Enrichment Analysis, GSEA to evaluate whether a lysosomal gene signature panel (consisting of 360 lysosomal gene transcripts from the Mouse Lysosome Gene Database (mLGDB; http://lysosome.unipg.it/mouse.php) was significantly negatively enriched in Rptor cKO epidermis.
 
Contributor(s) Lotan TL, Asrani K, Sood A, Murali S, Na C, Kaur H, Khan Z, Lam B, Phatak P, Noë M, Anchoori RK, Talbot CC Jr, Smith B, Skaro M
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Submission date Jan 07, 2019
Last update date Apr 16, 2020
Contact name KAUSHAL VIJAY ASRANI
E-mail(s) [email protected]
Phone 4109268061
Organization name JOHNS HOPKINS MEDICINE
Street address 1550 ORLEANS
City BALTIMORE
State/province MD
ZIP/Postal code 21231
Country USA
 
Platforms (1)
GPL20775 [MTA-1_0] Affymetrix Mouse Transcriptome Array 1.0 [transcript (gene) CSV version]
Samples (6)
GSM3553409 Rptor cKO_1
GSM3553410 Rptor cKO_2
GSM3553411 Rptor cKO_3
Relations
BioProject PRJNA513331

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124754_RAW.tar 140.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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