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Series GSE124845 Query DataSets for GSE124845
Status Public on Apr 04, 2019
Title Insulin receptor associates with promoters genome-wide and regulates gene expression [RNA-seq 2]
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq analysis identifies transcripts regulated by HCF-1 expression
 
Overall design Examination of differentially expressed genes in response to HCF-1 siRNA vs con siRNA in HepG2 cells, using eight biological replicates for each condition (RNA-seq).
 
Contributor(s) Flanagan JG, Hancock ML
Citation(s) 30955890
Submission date Jan 09, 2019
Last update date Jul 15, 2019
Contact name John G Flanagan
E-mail(s) [email protected]
Phone 6174320330
Organization name Harvard Medical School
Department Cell Biology
Lab Flanagan
Street address 200 Longwood Ave, Building C2, Room 523
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (16)
GSM3556991 HepG2_consi_1
GSM3556992 HepG2_consi_2
GSM3556993 HepG2_consi_3
This SubSeries is part of SuperSeries:
GSE107336 Insulin receptor associates with promoters genome-wide and regulates gene expression
Relations
BioProject PRJNA513981
SRA SRP178073

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124845_norm_counts_DESeq2_HCF1si_vs_consi.csv.gz 2.3 Mb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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