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Series GSE124863 Query DataSets for GSE124863
Status Public on Mar 06, 2019
Title TCP-seq of yeast initiation factor mutants
Organism Saccharomyces cerevisiae
Experiment type Expression profiling by high throughput sequencing
Other
Summary Each mutant was cultured in duplicate, and from each culture two fractions were sequenced: Total fragmented RNA, and small ribosomal subunit footprints.
 
Overall design Each mutant was cultured in duplicate, and from each culture two fractions were sequenced: Total fragmented RNA, and small ribosomal subunit footprints.
 
Contributor(s) Sen ND, Archer SK, Hinnebusch AG
Citation(s) 31299079
Submission date Jan 09, 2019
Last update date Jul 18, 2019
Contact name Stuart Kenneth Archer
Organization name Monash University
Department Monash Bioinformatics Platform
Street address 15 Innovation Walk, Monash University
City Clayton
State/province VIC
ZIP/Postal code 3800
Country Australia
 
Platforms (1)
GPL17342 Illumina HiSeq 2500 (Saccharomyces cerevisiae)
Samples (28)
GSM3557526 Ft_dbp1_a
GSM3557527 Ft_dbp1_b
GSM3557528 Ft_ded1cs_a
Relations
BioProject PRJNA514031
SRA SRP178111

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE124863_RAW.tar 1.8 Gb (http)(custom) TAR (of BED)
GSE124863_all_artefacts.txt.gz 263 b (ftp)(http) TXT
GSE124863_posClassCounts.tsv.gz 543.0 Kb (ftp)(http) TSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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