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| Status |
Public on Feb 10, 2020 |
| Title |
Double-stranded Alu RNAs, type 1 IFN responses, and relapsing remitting multiple sclerosis |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
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| Summary |
We report here an double stranded RNA sequencing from multiple sclerosis patient blood samples
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| Overall design |
Whole blood samples (~2.5 ml) were collected in PAXGENE tubes to immediately stabilize endogenous RNA from the following patient groups: 1) patients at the indicated times after their first clinical event suggestive of presence of RRMS commonly referred to as a clinically isolated event or CIS (MS-C) who later went on to receive a diagnosis of RRMS, files labeled as sample 1, sample 2, sample 3 or MS-C 1, MS-C 2, MS-C 3, and healthy controls, sample 4, sample 5, sample 6 or HC 1, HC 2, HC 3.
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| Contributor(s) |
Aune TM, Karijolich J |
| Citation(s) |
30826177 |
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| Submission date |
Feb 12, 2019 |
| Last update date |
Jul 05, 2022 |
| Contact name |
John Karijolich |
| E-mail(s) |
[email protected]
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| Organization name |
Vanderbilt University Medical Center
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| Department |
PMI
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| Lab |
John Karijolich Lab
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| Street address |
1211 Medical Center Drive
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| City |
Nashville |
| State/province |
TN |
| ZIP/Postal code |
37232 |
| Country |
USA |
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| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
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| Samples (6)
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| Relations |
| BioProject |
PRJNA521868 |
| SRA |
SRP185630 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE126427_RAW.tar |
9.0 Mb |
(http)(custom) |
TAR (of TXT) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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