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Series GSE12686 Query DataSets for GSE12686
Status Public on Dec 26, 2008
Title Expression data from Neisseria gonorrhoeae (FA19)
Organism Neisseria gonorrhoeae
Experiment type Expression profiling by array
Summary Naturally occurring mtrR mutants of gonococci displaying clinically relevant levels of antibiotic resistance are often isolated from patients and mtrR mutants have been reported to be more fit than the wild type parent strain in a murine vaginal infection model. DNA-binding proteins, such as MtrR, that negatively regulate bacterial efflux pump genes have been considered to be “local” gene regulators, although there is increasing evidence that they can directly or indirectly influence expression of other genes. To define the regulatory properties of MtrR we employed microarray analysis of isogenic MtrR-positive and MtrR-negative gonococci.

Keywords: single time point
 
Overall design RNA was isolated at mid-log growth for expression analysis
 
Contributor(s) Jackson L, Dyer D, Folster J, Johnson P, Dhulipali V, Shafer W
Citation(s) 18978065
Submission date Sep 05, 2008
Last update date Apr 05, 2012
Contact name Lydgia Jackson
E-mail(s) [email protected], [email protected]
Phone 405 271-1201
Fax 405 271-1204
Organization name University of Oklahoma Health Sciences Center
Department Microbiology and Immunology
Lab David Dyer
Street address 975 NE 10th Street
City Oklahoma City
State/province OK
ZIP/Postal code 73104
Country USA
 
Platforms (1)
GPL7218 OUHSC_Neisseria gonorrhoeae_MPAUT1a520274F
Samples (6)
GSM318543 FA19 mid-log replicate 1
GSM318544 FA19 mid-log replicate 2
GSM318545 FA19 mid-log replicate 3
Relations
BioProject PRJNA112689

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE12686_GeneSpring_expression_analysis_Neisseria_gonorrhoeae.txt 501.3 Kb (ftp)(http) TXT
GSE12686_NG_by_NM_list.txt 14.8 Kb (ftp)(http) TXT
GSE12686_RAW.tar 11.8 Mb (http)(custom) TAR (of CEL)
GSE12686_README.txt 909 b (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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