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Series GSE127569 Query DataSets for GSE127569
Status Public on Mar 01, 2019
Title Comparison of methylome data generated with HiSeq X Ten and NovaSeq
Organism Homo sapiens
Experiment type Methylation profiling by high throughput sequencing
Summary To compare the difference of sequencing platform, a sequencing library was served for sequencing on HiSeq X Ten and NovaSeq 6000.
 
Overall design Whole-genome bisulfite sequencing library was prepared with tPBAT protocol, then the library was served for sequencing on HiSeq X Ten and NovaSeq 6000.
 
Contributor(s) Miura F
Citation(s) 31114914
Submission date Feb 28, 2019
Last update date May 31, 2019
Contact name Fumihito Miura
Organization name The University of Tokyo
Department Graduate School of Frontier Sciences
Street address Kashiwanoha 5-1-5
City Kashiwa
State/province Chiba
ZIP/Postal code 277-8562
Country Japan
 
Platforms (2)
GPL20795 HiSeq X Ten (Homo sapiens)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (2)
GSM3636142 IMR90 tPBAT Library, HiSeq X Ten
GSM3636143 IMR90 tPBAT Library, NovaSeq
Relations
BioProject PRJNA524929
SRA SRP187153

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE127569_RAW.tar 1.2 Gb (http)(custom) TAR (of BEDGRAPH)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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