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Series GSE128989 Query DataSets for GSE128989
Status Public on Mar 29, 2019
Title Identification of gene expression pattern in Brassica rapa floral tissues including Flowerbuds (≤ 2mm), Flowerbuds (≤ 4mm), Stamen and Carpel
Organism Brassica rapa
Experiment type Expression profiling by array
Summary Investigation of differentially expressed gene in floral tissues of of Brassica rapa in comparison with leaves as control
To unravel the transcriptomic changes associated with small early floral buds (<2 mm; FB2), large early floral buds (2-4 mm; FB4), stamen (ST) and carpel (CP) tissues, transcriptome profiling was carried out with Br300K oligo microarray.
 
Overall design A twelve chip study using total RNA recovered from small early floral buds (<2 mm; FB2), large early floral buds (2-4 mm; FB4), stamen (ST) and carpel (CP) tissues of vernalization sensitive rassica rapa plants plants and non-vernalised leaves (vegetative tissue) as control
 
Contributor(s) Lee S, Lim M
Citation(s) 31222475
Submission date Mar 28, 2019
Last update date Jun 30, 2019
Contact name Soo In Lee
E-mail(s) [email protected]
Phone 063-238-4618
Organization name National Institute of Agricultural Sciences (NAS)
Department Agricultural Biotechnology
Street address Nongsaengmyeong-ro, Wansan-gu
City Jeonju-si
State/province Jeollabuk-do
ZIP/Postal code 54874
Country South Korea
 
Platforms (1)
GPL17248 Brassica rapa 300k Microarray v2.0 [2007-10-15_GGB_B_rapa_082207]
Samples (11)
GSM3689570 Leaves_Non-vernalized_rep1
GSM3689571 Leaves_Non-vernalized_rep2
GSM3689572 Leaves_Non-vernalized_rep3
Relations
BioProject PRJNA529653

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE128989_RAW.tar 82.2 Mb (http)(custom) TAR (of PAIR, TXT)
Processed data included within Sample table
Processed data provided as supplementary file

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