NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE130206 Query DataSets for GSE130206
Status Public on Apr 24, 2019
Title Stabilizing Heterochromatin by DGCR8 Alleviates Senescence and Osteoarthritis (ChIP-seq)
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary DiGeorge syndrome critical region 8 (DGCR8) is a critical component of the canonical microprocessor complex for microRNA biogenesis. However, the non-canonical functions of DGCR8 have not been studied. Here, we demonstrate that DGCR8 plays an important role in maintaining heterochromatin organization and preventing aging. An N-terminal-truncated version of DGCR8 (DR8dex2) accelerated senescence in human mesenchymal stem cells (hMSCs) independent of its miRNA-processing activity, which is mediated by its C-terminal domain. Further studies revealed that DGCR8 maintained heterochromatin organization by interacting with the nuclear envelope protein Lamin B1, and heterochromatin-associated proteins, KAP1 and HP1g Overexpression of any of these proteins, including DGCR8, reversed premature senescent phenotypes in DR8dex2 hMSCs. Finally, DGCR8 was downregulated in pathological and naturally aged hMSCs, whereas DGCR8 overexpression alleviated hMSC aging and osteoarthritis in mice. Taken together, these analyses uncovered a novel, miRNA-independent role for DGCR8 in maintaining heterochromatin organization and preventing senescence. DGCR8 may therefore represent a new therapeutic target for alleviating human aging-related disorders.
 
Overall design H3K9me3 ChIP-seq profiles of DR8dex2 hMSCs transduced with Luc, DR8-WT, or DR8-mtDRBD
 
Contributor(s) Liu G
Citation(s) 31350386
Submission date Apr 23, 2019
Last update date Aug 06, 2019
Contact name Zunpeng Liu
E-mail(s) [email protected]
Phone +86 15510715055
Organization name State Key Laboratory of Stem Cell and Reproductive Biology
Department Institute of Zoology, Chinese Academy of Sciences
Lab Jing Qu
Street address Beichen West Road
City Beijing
ZIP/Postal code 100101
Country China
 
Platforms (1)
GPL20795 HiSeq X Ten (Homo sapiens)
Samples (15)
GSM3733775 ChIP-DR8dex2_Luc-1
GSM3733776 ChIP-DR8dex2_Luc-2
GSM3733777 ChIP-DR8dex2_Luc-3
Relations
BioProject PRJNA534277
SRA SRP193489

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE130206_DR8dex2_Luc_peaks.txt.gz 1.9 Mb (ftp)(http) TXT
GSE130206_DR8dex2_MT_peaks.txt.gz 2.7 Mb (ftp)(http) TXT
GSE130206_DR8dex2_WT_peaks.txt.gz 4.7 Mb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap