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| Status |
Public on Oct 01, 2020 |
| Title |
Dual-RNA sequencing of dendritic cells challenged with Aspergillus fumigatus |
| Organisms |
Homo sapiens; Aspergillus fumigatus |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Dendritic cells and A. fumigatus were co-cultured with two different MOIs (1 or 0,5) for 2, 4 or 6 hours. Single-cultures of dendritic cells and A. fumigatus serve as controls. RNA was isolated and processed for next generation sequencing.
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| |
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| Overall design |
12 samples, varying degrees MOI and treatment duration, no replicates
|
| |
|
| Contributor(s) |
Wallstabe J, Löffler J, Linde J, Wolf T, Putzmann P |
| Citation(s) |
33207195 |
| |
| Submission date |
Aug 06, 2019 |
| Last update date |
Jan 06, 2021 |
| Contact name |
Bastian Seelbinder |
| E-mail(s) |
[email protected]
|
| Organization name |
Hans-Knoell-Institute Jena
|
| Department |
Systems Biology and Bioinformatics
|
| Street address |
Adolf-Reichwein-Straße 23
|
| City |
Jena |
| ZIP/Postal code |
07747 |
| Country |
Germany |
| |
|
| Platforms (3) |
| GPL18573 |
Illumina NextSeq 500 (Homo sapiens) |
| GPL23268 |
Illumina NextSeq 500 (Aspergillus fumigatus) |
| GPL26921 |
Illumina NextSeq 500 (Aspergillus fumigatus; Homo sapiens) |
|
| Samples (12)
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|
| Relations |
| BioProject |
PRJNA558954 |
| SRA |
SRP217538 |
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