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Series GSE13785 Query DataSets for GSE13785
Status Public on Nov 10, 2010
Title Novel mediators of eicosanoid and epithelial nitric oxide production in asthma
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Asthma is a heterogeneous disease. Exercise-induced bronchoconstriction (EIB) is a distinct syndrome that occurs in 30-50% of asthmatics and is characterized by high levels of pro-inflammatory eicosanoids. We identified genes differentially expressed in the airways of asthmatics with EIB relative to asthmatics without EIB. Genes related to epithelial repair and mast cell infiltration including beta-tryptase and carboxypeptidase A3 were upregulated by exercise challenge in the asthma group with EIB. We confirmed that two novel mediators trefoil factor 3 (TFF3) and transglutaminase 2 (TGM2) have increased expression in airways cells and secreted product in the airways. In vitro studies indicate that 1) TFF3 induces nitric oxide synthase in airway epithelial cells from asthmatics and 2) TGM2 augments the enzymatic activity of secreted phospholipase A2 (sPLA2) group X, an enzyme recently been implicated in asthma pathogenesis. Since PLA2 serves as the first rate-limiting step leading to eicosanoid generation, these results suggest that TGM2 may be a key initiator of the airway inflammatory cascade in asthma.
 
Overall design EIB positive and EIB negative subjects sampled pre- and post-exercise
 
Contributor(s) Beyer RP, Hallstrand TS, Wurfel MM, Lai Y, Ni Z, Gelb MH, Altemeier WA, Aitken ML, Henderson WR
Citation(s) 20052409
Submission date Dec 01, 2008
Last update date Mar 25, 2019
Contact name James William MacDonald
E-mail(s) [email protected]
Organization name University of Washington
Department Environmental and Occupational Health Sciences
Street address 4225 Roosevelt Way NE
City Seattle
State/province WA
ZIP/Postal code 98105-6099
Country USA
 
Platforms (2)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (22)
GSM346858 Subject6_EIB_negative_pre_exercise
GSM346859 Subject6_EIB_negative_post_exercise
GSM346860 Subject7_EIB_positive_pre_exercise
Relations
BioProject PRJNA110615

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE13785_RAW.tar 90.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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