GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Series GSE140561
Query DataSets for GSE140561
Status
Public on Feb 10, 2020
Title
The RNA N6-methyladenosine regulates chromatin remodeling and transcription [HEC-1-A_seq]
Organism
Homo sapiens
Experiment type
Expression profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
31949099
Submission date
Nov 18, 2019
Last update date
Feb 10, 2020
Contact name
Xiaoyang Dou
E-mail(s)
[email protected]
Organization name
Center for Excellence in Molecular Cell Science, CAS
Street address
320 Yue Yang Road
City
Shanghai
ZIP/Postal code
200031
Country
China
Platforms (2)
GPL20301
Illumina HiSeq 4000 (Homo sapiens)
GPL24676
Illumina NovaSeq 6000 (Homo sapiens)
Samples (40)
Less...
More...
GSM4174069
METTL3_Control_Input_r1 [HEC-1-A]
GSM4174070
METTL3_Control_Input_r2 [HEC-1-A]
GSM4174071
METTL3_KD_Input_r1 [HEC-1-A]
GSM4174072
METTL3_KD_Input_r2 [HEC-1-A]
GSM4174073
METTL3_Control_H3K4me3_r1 [HEC-1-A]
GSM4174074
METTL3_Control_H3K4me3_r2 [HEC-1-A]
GSM4174075
METTL3_KD_H3K4me3_r1 [HEC-1-A]
GSM4174076
METTL3_KD_H3K4me3_r2 [HEC-1-A]
GSM4174077
METTL3_Control_H3K27ac_r1 [HEC-1-A]
GSM4174078
METTL3_Control_H3K27ac_r2 [HEC-1-A]
GSM4174079
METTL3_KD_H3K27ac_r1 [HEC-1-A]
GSM4174080
METTL3_KD_H3K27ac_r2 [HEC-1-A]
GSM4174095
METTL3_Control_Input_r1 [HEC-1-A: MeRIP]
GSM4174096
METTL3_Control_Input_r2 [HEC-1-A: MeRIP]
GSM4174097
METTL3_KD_Input_r1 [HEC-1-A: MeRIP]
GSM4174098
METTL3_KD_Input_r2 [HEC-1-A: MeRIP]
GSM4174099
METTL3_Control_MeRIP_r1 [HEC-1-A: MeRIP]
GSM4174100
METTL3_Control_MeRIP_r2 [HEC-1-A: MeRIP]
GSM4174101
METTL3_KD_MeRIP_r1 [HEC-1-A: MeRIP]
GSM4174102
METTL3_KD_MeRIP_r2 [HEC-1-A: MeRIP]
GSM4174151
METTL3_Control_10m_r1 [HEC-1-A]
GSM4174152
METTL3_Control_10m_r2 [HEC-1-A]
GSM4174153
METTL3_Control_20m_r1 [HEC-1-A]
GSM4174154
METTL3_Control_20m_r2 [HEC-1-A]
GSM4174155
METTL3_Control_30m_r1 [HEC-1-A]
GSM4174156
METTL3_Control_30m_r2 [HEC-1-A]
GSM4174157
METTL3_Control_60m_r1 [HEC-1-A]
GSM4174158
METTL3_Control_60m_r2 [HEC-1-A]
GSM4174159
METTL3_KD_10m_r1 [HEC-1-A]
GSM4174160
METTL3_KD_10m_r2 [HEC-1-A]
GSM4174161
METTL3_KD_20m_r1 [HEC-1-A]
GSM4174162
METTL3_KD_20m_r2 [HEC-1-A]
GSM4174163
METTL3_KD_30m_r1 [HEC-1-A]
GSM4174164
METTL3_KD_30m_r2 [HEC-1-A]
GSM4174165
METTL3_KD_60m_r1 [HEC-1-A]
GSM4174166
METTL3_KD_60m_r2 [HEC-1-A]
GSM4174167
METTL3_Control_nuclearRNA_r1 [HEC-1-A]
GSM4174168
METTL3_Control_nuclearRNA_r2 [HEC-1-A]
GSM4174169
METTL3_KD_nuclearRNA_r1 [HEC-1-A]
GSM4174170
METTL3_KD_nuclearRNA_r2 [HEC-1-A]
This SuperSeries is composed of the following SubSeries:
Less...
More...
GSE140555
The RNA N6-methyladenosine regulates chromatin remodeling and transcription [HEC-1-A_seq_ChIP_histone]
GSE140557
The RNA N6-methyladenosine regulates chromatin remodeling and transcription [HEC-1-A_seq_RNA_MeRIP]
GSE140559
The RNA N6-methyladenosine regulates chromatin remodeling and transcription [HEC-1-A_seq_RNA_nascent]
GSE140560
The RNA N6-methyladenosine regulates chromatin remodeling and transcription [HEC-1-A_seq_RNA_nuclear]
Relations
BioProject
PRJNA590179
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE140561_RAW.tar
14.0 Mb
(http)
(custom)
TAR (of NARROWPEAK, TXT)
SRA Run Selector
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
Less...
More...