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Series GSE145331 Query DataSets for GSE145331
Status Public on Aug 01, 2020
Title Profiling of histone modification H3K27me3 in Norway spruce embryonic calli and non-embryonic calli
Organism Picea abies
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Histone modification H3K27me3 profilings by the CUT&RUN method (Skene et al., 2017) were performed using embryonic callus and non-embryonic callus of Picea abies to identify genes related to somatic embryogenesis capacity.
 
Overall design 2 different calli with 2 different conditions and seedlings.
 
Contributor(s) Nakamura M
Citation(s) 32894759
Submission date Feb 14, 2020
Last update date Oct 31, 2020
Contact name Miyuki Nakamura
E-mail(s) [email protected]
Organization name Swedish University of Agricultural Sciences
Street address Ulls Grand1
City Uppsala
ZIP/Postal code 75007
Country Sweden
 
Platforms (1)
GPL19695 Illumina HiSeq 2500 (Picea abies)
Samples (5)
GSM4314896 Seedlings
GSM4314897 SEC_Ni
GSM4314899 SEC_Id
Relations
BioProject PRJNA606776
SRA SRP249572

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE145331_RAW.tar 4.4 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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