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GEO accession:
Series GSE145878
Query DataSets for GSE145878
Status
Public on Nov 03, 2021
Title
p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia
Organism
Mus musculus
Experiment type
Expression profiling by high throughput sequencing
Genome binding/occupancy profiling by high throughput sequencing
Methylation profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
34622806
Submission date
Feb 25, 2020
Last update date
Nov 04, 2021
Contact name
Stephen Nimer
Organization name
University of Miami
Department
Sylvester Comprehensive Cancer Center
Street address
1120 NW 14th ST
City
Miami
State/province
FL
ZIP/Postal code
33136
Country
USA
Platforms (4)
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More...
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL17021
Illumina HiSeq 2500 (Mus musculus)
GPL19057
Illumina NextSeq 500 (Mus musculus)
GPL24247
Illumina NovaSeq 6000 (Mus musculus)
Samples (74)
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GSM4336118
WT_RNAseq_Rep1
GSM4336119
WT_RNAseq_Rep2
GSM4336120
WT_RNAseq_Rep3
GSM4336121
P300KO_RNAseq_Rep1
GSM4336122
P300KO_RNAseq_Rep2
GSM4336123
P300KO_RNAseq_Rep3
GSM4336124
TET2KO_RNAseq_Rep1
GSM4336125
TET2KO_RNAseq_Rep2
GSM4336126
TET2KO_RNAseq_Rep3
GSM4336127
p300KO_TET2KO_RNAseq_Rep1
GSM4336128
p300KO_TET2KO_RNAseq_Rep2
GSM4336129
p300KO_TET2KO_RNAseq_Rep3
GSM4338307
WT_ATACseq_Rep1
GSM4338308
WT_ATACseq_Rep2
GSM4338309
P300KO_ATACseq_Rep1
GSM4338310
P300KO_ATACseq_Rep2
GSM4338311
TET2KO_ATACseq_Rep1
GSM4338312
TET2KO_ATACseq_Rep2
GSM4338313
P300KO_TET2KO_ATACseq_Rep1
GSM4338314
P300KO_TET2KO_ATACseq_Rep2
GSM4338315
WT_H3K27ac_ChIPseq_Rep1
GSM4338316
P300KO_H3K27ac_ChIPseq_Rep1
GSM4338317
TET2KO_H3K27ac_ChIPseq_Rep1
GSM4338318
P300KO_TET2KO_H3K27ac_ChIPseq_Rep1
GSM4338319
WT_H3_ChIPseq_Rep1
GSM4338320
P300KO_H3_ChIPseq_Rep1
GSM4338321
TET2KO_H3_ChIPseq_Rep1
GSM4338322
P300KO_TET2KO_H3_ChIPseq_Rep1
GSM4338323
WT_5hmc_DIPseq_Rep1
GSM4338324
WT_5hmc_DIPseq_Rep2
GSM4338325
WT_5hmc_DIPseq_Rep3
GSM4338326
P300KO_5hmc_DIPseq_Rep1
GSM4338327
P300KO_5hmc_DIPseq_Rep2
GSM4338328
P300KO_5hmc_DIPseq_Rep3
GSM4338329
TET2KO_5hmc_DIPseq_Rep1
GSM4338330
TET2KO_5hmc_DIPseq_Rep2
GSM4338331
TET2KO_5hmc_DIPseq_Rep3
GSM4338332
P300_TET2KO_5hmc_DIPseq_Rep1
GSM4338333
P300_TET2KO_5hmc_DIPseq_Rep2
GSM4338334
P300_TET2KO_5hmc_DIPseq_Rep3
GSM4338335
WT_Input_DIPseq_Rep1
GSM4338336
WT_Input_DIPseq_Rep2
GSM4338337
WT_Input_DIPseq_Rep3
GSM4338338
P300KO_Input_DIPseq_Rep1
GSM4338339
P300KO_Input_DIPseq_Rep2
GSM4338340
P300KO_Input_DIPseq_Rep3
GSM4338341
TET2KO_Input_DIPseq_Rep1
GSM4338342
TET2KO_Input_DIPseq_Rep2
GSM4338343
TET2KO_Input_DIPseq_Rep3
GSM4338344
P300KO_TET2KO_Input_DIPseq_Rep1
GSM4338345
P300KO_TET2KO_Input_DIPseq_Rep2
GSM4338346
P300KO_TET2KO_Input_DIPseq_Rep3
GSM4672182
WT_H3Kme1_Rep1
GSM4672183
P300KO_H3Kme1_Rep1
GSM4672184
TET2KO_H3Kme1_Rep1
GSM4672185
P300KO_TET2KO_H3Kme1_Rep1
GSM4672186
WT_H3Kme3_Rep1
GSM4672187
P300KO_H3Kme3_Rep1
GSM4672188
TET2KO_H3Kme3_Rep1
GSM4672189
P300KO_TET2KO_H3Kme3_Rep1
GSM4672190
WT_H3K27me3_Rep1
GSM4672191
P300KO_H3K27me3_Rep1
GSM4672192
TET2KO_H3K27me3_Rep1
GSM4672193
P300KO_TET2KO_H3K27me3_Rep1
GSM4672194
WT_Myb
GSM4672195
WT_IgG
GSM5068590
WT_ATACseq_Rep3
GSM5068591
WT_ATACseq_Rep4
GSM5068592
P300KO_ATACseq_Rep3
GSM5068593
P300KO_ATACseq_Rep4
GSM5068594
TET2KO_ATACseq_Rep3
GSM5068595
TET2KO_ATACseq_Rep4
GSM5068596
P300KO_TET2KO_ATACseq_Rep3
GSM5068597
P300KO_TET2KO_ATACseq_Rep4
This SuperSeries is composed of the following SubSeries:
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More...
GSE145819
p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia [RNA-Seq]
GSE145875
p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia [ATAC-Seq]
GSE145876
p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia [ChIP-seq]
GSE145877
p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia [DIP-seq]
GSE154493
p300 suppresses the transition of myelodysplastic syndrome to acute myeloid leukemia [ChIP-seq II]
Relations
BioProject
PRJNA608640
Download family
Format
SOFT formatted family file(s)
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TXT
Supplementary file
Size
Download
File type/resource
GSE145878_RAW.tar
22.3 Gb
(http)
(custom)
TAR (of BIGWIG, BW, NARROWPEAK)
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