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Series GSE147897 Query DataSets for GSE147897
Status Public on Sep 03, 2020
Title Post-transcriptional regulation of human endogenous retroviruses by RNA-Binding Motif Protein 4, RBM4
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 33020268
Submission date Apr 01, 2020
Last update date Oct 15, 2020
Contact name Stefan A Muljo
E-mail(s) [email protected]
Organization name NIH/NIAID
Street address 10 CENTER DR RM 11N306
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (3)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
GPL26180 Sequel (Homo sapiens)
Samples (20)
GSM4448403 Wild Type replicate 1
GSM4448404 Wild Type replicate 2
GSM4448405 Wild Type replicate 3
This SuperSeries is composed of the following SubSeries:
GSE147893 RNA-sequencing experiments to identify differentially expressed genes between Wild Type and RBM4 KO HAP1 cell line samples
GSE147895 Photoactivatable-Ribonucleotide-Enhanced Crosslinking and Immunoprecipitation (PAR-CLIP) of the RNA-binding protein (RBP) RBM4 in KBM-7 derived near-haploid human cell line, HAP1.
GSE147896 PacBio long-read RNA-sequencing to identify differentially expressed genes and repetitive elements between Wild Type RBM4 KO HAP1 cell line samples
Relations
BioProject PRJNA622495

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE147897_RAW.tar 4.1 Mb (http)(custom) TAR (of TSV)
SRA Run SelectorHelp

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