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| Status |
Public on Dec 31, 2022 |
| Title |
Target identification for R0199 |
| Organism |
Caulobacter vibrioides |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
In this study we determined the target spectrum of C. crescentus sRNA R0199 via pulse-expression followed by RNA-sequencing.
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| Overall design |
Transcriptome profiles of C. crescentus strain carrying either pBVMCS-6 (empty vector control) or pKF482 (pBVMCS-6 with R0199). The bacteria were grown to OD660=0.8, expression of R0199 was induced by addition of 0.5 mM vanillate, and RNA-samples were collected 15 minutes after induction. Three independent biological replicates for each condition were analyzed.
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| |
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| Contributor(s) |
Fröhlich K |
| Citation(s) |
38511926 |
| |
| Submission date |
Apr 07, 2020 |
| Last update date |
Apr 24, 2024 |
| Contact name |
Kathrin Fröhlich |
| E-mail(s) |
[email protected]
|
| Organization name |
Friedrich-Schiller-Universität Jena
|
| Department |
Fakultät für Biowissenschaften, Bacterial RNA Biology
|
| Lab |
AG Fröhlich
|
| Street address |
Winzerlaer Straße 2
|
| City |
Jena |
| State/province |
Thuringia |
| ZIP/Postal code |
07745 |
| Country |
Germany |
| |
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| Platforms (1) |
| GPL28356 |
Illumina HiSeq 1500 (Caulobacter vibrioides) |
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| Samples (6)
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| This SubSeries is part of SuperSeries: |
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| Relations |
| BioProject |
PRJNA623515 |
| SRA |
SRP255573 |
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