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Series GSE153556 Query DataSets for GSE153556
Status Public on Jul 01, 2020
Title Endogenous glucocorticoid signaling regulates effector differentiation and development of dysfunction in CD8+ T cells in the tumor microenvironment
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Identifying signals in the tumor microenvironment (TME) that shape CD8+ T cell phenotype can inform novel therapeutic approaches for cancer. Here, we identified a gradient of increasing glucocorticoid receptor (GR) expression and signaling from naive to dysfunctional CD8+ tumor-infiltrating lymphocytes (TILs). Conditional deletion of the GR in CD8+ TILs resulted in improved effector differentiation, reduced TCF-1 expression, and failure to develop dysfunctional phenotype, culminating in tumor growth inhibition. GR signaling transactivated the expression of multiple checkpoint receptors and promoted the induction of several dysfunction-associated genes upon T cell activation. In the TME, monocyte/macrophages produced glucocorticoids and genetic ablation of steroidogenesis in these cells as well localized pharmacologic inhibition of glucocorticoid biosynthesis dramatically improved tumor growth control. Active glucocorticoid signaling further associated with failure to respond to checkpoint blockade in both pre-clinical models and melanoma patients, highlighting the clinical relevance of targeting endogenous steroid signaling to enhance anti-tumor T cell responses.
 
Overall design wild type (E8i-Cre-Nr3c1fl/fl) or E8i-Cre+Nr3c1fl/fl CD8+ T cells activated in the presence or absence of glucocorticoid (GC;dexamethasone) for 72hrs and wild type CD8+ T cell 9 days activated in the presence or absence of glucocorticoid (GC;dexamethasone), IL27 or both
 
Contributor(s) Carrizosa Anderson A, Madi A, Acharya N
Citation(s) 32937153
Submission date Jun 30, 2020
Last update date Sep 30, 2020
Contact name Asaf Madi
E-mail(s) [email protected]
Organization name BWH
Department Neurology
Lab Ana Carrizosa Anderson
Street address 60 Fenwood Road, BTM 10016F
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platforms (1)
GPL13112 Illumina HiSeq 2000 (Mus musculus)
Samples (24)
GSM4647076 D1: CD8_1_WT_Ctrl_Day3
GSM4647077 D2: CD8_2_WT_Ctrl_Day3
GSM4647078 D3: CD8_3_WT_Ctrl_Day3
Relations
BioProject PRJNA643231
SRA SRP269378

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE153556_rsem.genes.counts.matrix.TMM_normalized.FPKM.txt.gz 890.4 Kb (ftp)(http) TXT
GSE153556_rsem.genes.counts.matrix.txt.gz 1.0 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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