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| Status |
Public on Nov 04, 2020 |
| Title |
Genome-wide study reveals the function of transcription factor TREE1 in ethylene signaling |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Purpose: Next-generation sequencing (NGS) has been used to study the gene expression in Arabidopsis seedlings under air and ethylene treatment. The goal of this study is to uncover how TREE1 and its homologous gene DAZ3 are involved into gene expression regulation in response to ethylene.
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| Overall design |
Whole seedling mRNA profiles of 3-day old daz3 tree1 was generated by sequencing, in 2 replications, using Illumina HiSeq 2000
Gene accession ID for TREE1: AT4G35610
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| |
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| Contributor(s) |
Qiao H, Wang L |
| Citation(s) |
33139535 |
| |
| Submission date |
Aug 31, 2020 |
| Last update date |
Nov 04, 2020 |
| Contact name |
Hong Qiao |
| Organization name |
The University of Texas at Austin
|
| Department |
Department of Molecular Biosciences
|
| Lab |
Qiao lab
|
| Street address |
2506 speedway, NMS5.324
|
| City |
Austin |
| State/province |
TEXAS |
| ZIP/Postal code |
78731 |
| Country |
USA |
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| Platforms (1) |
| GPL13222 |
Illumina HiSeq 2000 (Arabidopsis thaliana) |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA660407 |
| SRA |
SRP279435 |
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