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Series GSE157454 Query DataSets for GSE157454
Status Public on Jan 26, 2021
Title Plasmodium transcription repressor AP2-O3 regulates sex-specific identity of gene expression in female gametocytes [ChIP-seq]
Organism Plasmodium yoelii yoelii
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary Male and female gametocytes are sexual precursor cells essential for transmission of malaria parasite in the mosquitoes. Differentiation of gametocytes to fertile gametes (gametogenesis) relies on the gender-specific transcriptome. However, how the parasites establish distinct repertoire of gene transcription in the male and female gametocytes remains largely unknown. Here, we report that an Apetala2 (AP2) family transcription factor (TF) AP2-O3 operates as a transcription repressor regulating female gametocyte transcriptome. AP2-O3 is specifically localized in the nucleus of the female gametocytes. AP2-O3-deficient parasites produce apparently normal female gametocytes, which fail to differentiate to fully fertile female gametes, leading to developmental arrest in fertilization and early development post-fertilization. AP2-O3 disruption causes massive up-regulation of transcriptionally dormant male genes and simultaneously down-regulation of highly transcribed female genes in female gametocytes. ChIP-seq and EMSA analysis establish AP2-O3 as a transcription repressor that targets a significant proportion of the upregulated male genes by recognizing an eight-base DNA motif in the promoters. In addition, the maternal AP2-O3 is removed after fertilization, which is required for the zygote to ookinete development. These results demonstrate that global transcriptional repression of male genes in the female gametocytes is required for safeguarding female-specific transcriptome and essential for the mosquito transmission of Plasmodium.
 
Overall design We report genome-wide binding profile of Plasmodium transcription factor AP2-O3. Two independent experiments were peformed.
 
Contributor(s) Li Z
Citation(s) 33665945
Submission date Sep 03, 2020
Last update date Apr 27, 2021
Contact name Zhenkui Li
E-mail(s) [email protected]
Organization name Xiamen University
Street address Xiangan south road
City Xiamen
State/province Fujian
ZIP/Postal code 361102
Country China
 
Platforms (1)
GPL29103 Illumina HiSeq 1500 (Plasmodium yoelii yoelii)
Samples (4)
GSM4766507 Input rep1
GSM4766508 HA-IP rep1
GSM4766509 Input rep2
This SubSeries is part of SuperSeries:
GSE157457 Malaria parasite transcription repressor AP2-O3 regulates sex-specific identity of gene expression in female gametocytes
Relations
BioProject PRJNA661329
SRA SRP280025

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Supplementary file Size Download File type/resource
GSE157454_RAW.tar 249.3 Mb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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