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Series GSE15771 Query DataSets for GSE15771
Status Public on Apr 25, 2009
Title The IRE1α-XBP1 Pathway of the Unfolded Protein Response is Required for Adipogenesis
Organism Mus musculus
Experiment type Expression profiling by array
Summary Signaling cascades during adipogenesis culminate in the expression of two essential adipogenic factors, PPARγ and C/EBPα. Here we demonstrate that the IRE1α-XBP1 pathway, the most conserved branch of the unfolded protein response (UPR), is indispensable for adipogenesis. Indeed, XBP1-deficient mouse embryonic fibroblasts and 3T3-L1 cells with XBP1 or IRE1α knockdown exhibit profound defects in adipogenesis. Intriguingly, C/EBPβ, a key early adipogenic factor, induces Xbp1 expression by directly binding to its proximal promoter region. Subsequently, XBP1 binds to the promoter of Cebpa and activates its gene expression. The posttranscriptional splicing of Xbp1 mRNA by IRE1α is required as only the spliced form of XBP1 (XBP1s) rescues the adipogenic defect exhibited by XBP1-deficient cells. Taken together, our data show that the IRE1α-XBP1 pathway plays a key role in adipocyte differentiation by acting as a critical regulator of the morphological and functional transformations during adipogenesis.
 
Overall design The Xbp1 deficient MEFs are subjected to adipogenesis using standard drug induction. The cells are collected at day 0 and day 3. Total RNA are extracted from the cells and used for one channel microarray analysis. Expression levels on day 3 are compared to that on day 0.
 
Contributor(s) Sha H, He Y, Chen H, Wang C, Zenno A, Hang S, Yang X, Zhang X, Qi L
Citation(s) 19490910
Submission date Apr 21, 2009
Last update date Jan 18, 2013
Contact name Ling Qi
E-mail(s) [email protected]
Phone 607-254-8857
URL http://www.human.cornell.edu/che/DNS/qilab/index.cfm
Organization name Cornell University
Department Division of Nutritional Sciences
Lab Qi Lab
Street address 307 Biotech Bldg, Cornell Univ
City Ithaca
State/province NY
ZIP/Postal code 14853
Country USA
 
Platforms (1)
GPL6845 Phalanx Mouse OneArray
Samples (2)
GSM395761 XBP1 KO MEF_adipogenesis_d0
GSM395764 XBP1 KO MEF_adipogenesis_d3
Relations
BioProject PRJNA116837

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE15771_RAW.tar 340.0 Kb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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