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| Status |
Public on Apr 26, 2021 |
| Title |
Genome-wide binding of Ikaros in naive CD4+ T cells and Th0 at day1 |
| Organism |
Mus musculus |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
The aim of the project is to determine the binding sites of Ikaros in CD4+ T cells. To perform this, CD4 naive T cells (CD4 TN; d0) either rested or activated with anti-CD3+anti-CD28 Abs for 1 day (Th0 d1) were subjected to a ChIP using anti-Ikaros Ab followed by high throughput sequencing.
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| |
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| Overall design |
Chip-seq of naive and activated CD4+ T cells in WT cells.
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| |
|
| Contributor(s) |
Bernardi C, Ye T, Chan S, Kastner P, Charvet C |
| Citation(s) |
33893236 |
| |
| Submission date |
Sep 11, 2020 |
| Last update date |
Apr 28, 2021 |
| Contact name |
Tao YE |
| Organization name |
IGBMC (CNRS/INSERM/UDS)
|
| Street address |
1 rue Laurent Fries
|
| City |
Illkirch |
| ZIP/Postal code |
67404 |
| Country |
France |
| |
|
| Platforms (1) |
| GPL21103 |
Illumina HiSeq 4000 (Mus musculus) |
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| Samples (4)
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| This SubSeries is part of SuperSeries: |
| GSE157813 |
CD4+ T cells in presence or absence of Ikaros |
|
| Relations |
| BioProject |
PRJNA662892 |
| SRA |
SRP282038 |
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