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Series GSE158971 Query DataSets for GSE158971
Status Public on Sep 08, 2021
Title Generation of human blastocyst-like structures from pluripotent stem cells
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Due to ethical concerns and restricted access to human blastocysts, we lack a comprehensive understanding of early human embryogenesis. A reliable model system that can recapitulate early stages of human embryogenesis would help solve this problem.Here we report a robust three-dimensional (3D), two-step induction protocol for generating blastocyst-like structures (EPS-blastoids) from human extended pluripotent stem (EPS) cells. Morphological and single-cell transcriptomic analyses revealed that EPS-blastoids contain key cell lineages and are transcriptionally similar to human blastocysts. Furthermore, EPS-blastoids also exhibited the developmental potential to undergo post-implantation morphogenesis in vitro to form structures with a cellular composition and transcriptome signature similar to human embryos that had been cultured in vitro for 8 or 10 days. In conclusion, human EPS-blastoids provide a robust new experimental platform for studying early developmental stages of the human embryo.
 
Overall design To analyze the transcriptome signature of EPS-blasotids on different developmental days (including day6, day8 and day10).
 
Contributor(s) Min Z, Fan Y, Yu Y
Citation(s) 34489415
Submission date Oct 03, 2020
Last update date Sep 08, 2021
Contact name zheying min
E-mail(s) [email protected]
Organization name Peking University
Street address Yiheyuan road NO.5
City beijing
ZIP/Postal code 100871
Country China
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (3)
GSM4816780 Day6 EPS-blastoids
GSM4816781 Day8 EPS-blastoids
GSM4816782 Day10 EPS-blastoids
Relations
BioProject PRJNA667174
SRA SRP286266

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE158971_RAW.tar 397.6 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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