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Series GSE166422 Query DataSets for GSE166422
Status Public on Feb 10, 2021
Title Human Naïve Epiblast Cells Possess Unrestricted Lineage Potential
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Classical mouse embryology has established a paradigm of early development drivenby sequential lineage bifurcations. Accordingly, mouse embryonic stem cells derivedfrom early epiblast have lost the potency to produce extraembryonic trophectoderm.We show in contrast that human naive epiblast cells readily make trophectoderm.Inhibition of ERK signalling, instrumental in naive stem cell propagation, unexpectedlypotentiates trophectoderm formation, an effect enhanced by Nodal inhibition.Transcriptome analyses authenticate conversion into trophectoderm with subsequentproduction of syncitiotrophoblast, cytotrophoblast and trophoblast stem cells. Geneticperturbations indicate that NANOG suppresses and TFAP2C enables trophectoderminduction. Consistent with post-implantation progression, trophectoderm potential isextinguished in conventional human pluripotent stem cells, which instead makeamnion. Finally, human embryo epiblasts from late blastocysts efficiently generatetrophectoderm and differentiated trophoblast. Thus, pluripotent cells in the humanembryo retain extraembryonic lineage plasticity and regenerative potential untilimplantation. Harnessing this unanticipated regulative capacity may be beneficial forassisted reproduction technology.
 
Overall design Human naive pluripotent stem cells (HNES1) were differentiated to trophectoderm in N2B27 basal medium supplementated with PD0325902(PD03) and PD03+A1(PDA83). RNA samples were collected in a time course.
 
Contributor(s) Guo G, Spindlow D
Citation(s) 33831366
Submission date Feb 09, 2021
Last update date Jun 08, 2021
Contact name Daniel Spindlow
Organization name University of Exeter
Department Living Systems Institute
Lab Smith Lab
Street address Stocker Road
City Exeter
State/province Devon
ZIP/Postal code EX4 4QD
Country United Kingdom
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (20)
GSM5070915 HNES1-D1_1
GSM5070916 HNES1-D1_2
GSM5070917 HNES1-D1_3
Relations
BioProject PRJNA700867
SRA SRP305478

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Supplementary file Size Download File type/resource
GSE166422_counts.txt.gz 40.9 Mb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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