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Series GSE168681 Query DataSets for GSE168681
Status Public on Jun 02, 2021
Title Characterization of a key region involved in the NO stress response of Bacillus cereus
Organism Bacillus cereus
Experiment type Expression profiling by high throughput sequencing
Summary Bacterial response to nitric oxide (NO) is of major importance for bacterial survival, as NO stress is a main actor of the eukaryote immune response. Several pathogenic bacteria have developed gene regulation systems involved in detoxification and in repairing the damages caused by NO. However, bacterial mechanisms of NO resistance are poorly described for Gram positive bacteria and especially Bacillus cereus. This food born and opportunistic pathogen does not have the common weapon against NO described in other pathogenic or non-pathogenic bacteria, such as the transcriptional regulators norR and nsrR, nor NO reductases. Using a transcriptomic approach, we investigated the mechanisms used by B. cereus to fight against NO stress. A cluster of 6 genes was identified to be particularly overexpressed in the early response to NO stress. This cluster contains an iron-sulphur cluster repair enzyme, a nitrite reductase and three enzymes involved in siroheme biosynthesis. We show a co-expression and a close genetic localization implying a functional link between those genes. This cluster may play a pivotal role in the defence mechanisms used by B. cereus to fight against NO stress during infection.
 
Overall design Impact of NO on B. cereus gene expression
 
Contributor(s) Porrini C, Dervyn R, Guérin C, Nicolas P, Ramarao N
Citation(s) 34064887
https://doi.org/10.3390/ijms22105079
Submission date Mar 10, 2021
Last update date Jul 15, 2021
Contact name Cyprien Guérin
E-mail(s) [email protected]
Phone +33-1-3465-2896
Organization name INRAE
Lab MaIAGE
Street address INRAE - Domaine de Vilvert
City Jouy-en-Josas
ZIP/Postal code F-78350
Country France
 
Platforms (1)
GPL29834 Illumina NextSeq 500 (Bacillus cereus)
Samples (21)
GSM5155648 R12_t0min_0mM
GSM5155649 R12_t15min_0mM
GSM5155650 R12_t15min_10mM
Relations
BioProject PRJNA713379
SRA SRP310173

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Supplementary file Size Download File type/resource
GSE168681_data_DESeq2_log2_rpkm_prior_count_12_with_H_order_all_annot_counts_20181211.csv.gz 2.6 Mb (ftp)(http) CSV
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Raw data are available in SRA
Processed data are available on Series record

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