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Series GSE168990 Query DataSets for GSE168990
Status Public on Apr 01, 2021
Title Metabolic Reprogramming of Terminally Exhausted CD8+ T-cells by Interleukin-10 Enhances Anti-Tumour Immunity
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Terminally exhausted CD8+ T-cells, which hold certain level of anti-tumour cytotoxicity but largely reduced proliferation capacity, contribute directly to tumour growth control. However, this subpopulation do not respond to immune checkpoint blockades or most existing immunotherapies and are difficult to be reactivated. Here, we show that a half-life extended interleukin (IL)-10/Fc fusion protein directly expands the terminally exhausted CD8+ TILs and sustains their effector functions through in vivo metabolic reprogramming, leading to eradication of established solid tumours and durable cures in a majority of treated mice when combined with adoptive T-cell transfer immunotherapy. Our results provide preclinical evidence that IL-10/Fc is a safe and highly effective therapy that acts on a specific subset of CD8+ TILs distinct from those responding to immune checkpoint blockades. Thus, IL-10/Fc could complement and synergize with existing cancer immunotherapies for enhanced efficacy and response rates. We find that IL-10/Fc reprograms T-cell metabolism by promoting oxidative phosphorylation through the mitochondrial pyruvate carrier, suggesting that metabolic reprogramming is sufficient to revitalize terminally exhausted CD8+ TILs.
 
Overall design The goals of this study are to use NGS to perform transcriptome profiling (RNA-seq) to find the changes of the global gene expression programs of tumor-infiltrating terminally exhausted CD8+ T-cells from IL-10/Fc treated mice. PBS treated mice were used as controls. Total RNA was extracted and submitted to RNA-seq
Web link https://www.nature.com/articles/s41590-021-00940-2
 
Contributor(s) Guo Y, Xie Y, Tang L
Citation(s) 34031618
Submission date Mar 16, 2021
Last update date Jul 01, 2021
Contact name Li Tang
Organization name École polytechnique fédérale de Lausanne (EPFL)
Department Institute of Bioengineering (IBI) / Institute of Materials (IMX)
Lab Laboratory of Biomaterials for Immunoengineering (LBI)
Street address MED 1 2826, Station 9, CH-1015 Lausanne
City Lausanne
State/province Vaud
ZIP/Postal code 1015
Country Switzerland
 
Platforms (1)
GPL21493 Illumina HiSeq 3000 (Mus musculus)
Samples (6)
GSM5173673 PD-1+TIM-3+CD8+ TILs_PBS_rep1
GSM5173674 PD-1+TIM-3+CD8+ TILs_PBS_rep2
GSM5173675 PD-1+TIM-3+CD8+ TILs_IL-10/Fc_rep1
Relations
BioProject PRJNA714871
SRA SRP310862

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE168990_DEG.txt.gz 1.1 Mb (ftp)(http) TXT
GSE168990_RAW.tar 970.0 Kb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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