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| Status |
Public on Mar 23, 2021 |
| Title |
Transcriptomic changes upon ABA treatment dependent on VND transcription factors |
| Organism |
Arabidopsis thaliana |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Distinct transcriptomic changes upon ABA treatment are dependent on different VND transcription factors. We performed RNA-sequencing on mock and ABA-treated Arabidopsis plants to investigate the impact of VND1/2/3 and VND7 on gene expression changes upon ABA treatment.
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| Overall design |
Transcriptomic changes in 1cm roots of 5 day old Arabidopsis plants upon treatment with 1µM ABA/ mock for 8h. Genotypes used in this experiment: Col-0 (wt), vnd1 vnd2 vnd3 triple mutant and vnd7 mutant
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| |
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| Contributor(s) |
Augstein F, Ramachandran P, Carlsbecker A |
| Citation(s) |
34043949 |
| |
| Submission date |
Mar 22, 2021 |
| Last update date |
Jun 23, 2021 |
| Contact name |
Frauke Augstein |
| E-mail(s) |
[email protected]
|
| Organization name |
Uppsala University
|
| Department |
IOB
|
| Lab |
Carlsbecker
|
| Street address |
Almas Allé 5
|
| City |
Uppsala |
| ZIP/Postal code |
SE-756 51 |
| Country |
Sweden |
| |
|
| Platforms (1) |
| GPL17639 |
Illumina HiSeq 2500 (Arabidopsis thaliana) |
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| Samples (18)
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| This SubSeries is part of SuperSeries: |
| GSE169367 |
Blocking ABA-signaling and ABA-treatment; ABA treatment dependence on VND transcription factors |
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| Relations |
| BioProject |
PRJNA716333 |
| SRA |
SRP311690 |
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