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| Status |
Public on Feb 04, 2011 |
| Title |
Identification of KSHV, EBV and cellular miRNA targets in human B-cells using RIP-Chip |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
RIP-Chip was performed on DG75-eGFP, DG75-10/12, BCBL-1, BL41, BL41 B95.8 and Jijoye using anti-human Ago2 (11A9) antibodies. Anti-BrdU antibodies were used as controls for DG75-eGFP, DG75-10/12 and BCBL-1. Total RNA was used as control for BL41, BL41 B95.8 and Jijoye. Samples were analyzed on Affymetrix Gene ST 1.0 Arrays (2 independent biological replicates / sample)
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| Overall design |
KSHV, EBV and cellular miRNA targets were determined by RIP-Chip using monoclonal antibodies to human Ago2
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| Contributor(s) |
Dölken L, Malterer G, Grässer F, Meister G, Hoffmann R, Zimmer R, Koszinowski UH, Haas J |
| Citation(s) |
20413099 |
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| Submission date |
Jul 17, 2009 |
| Last update date |
Jul 26, 2018 |
| Contact name |
Lars Dölken |
| E-mail(s) |
[email protected]
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| Organization name |
University of Cambridge
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| Department |
Medicine
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| Lab |
Box 157, Level 5
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| Street address |
Addenbrookes Hospital, Hills Road
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| City |
Cambridge |
| State/province |
Cambridgeshire |
| ZIP/Postal code |
CB20QQ |
| Country |
United Kingdom |
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| Platforms (1) |
| GPL6244 |
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [transcript (gene) version] |
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| Samples (24)
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| Relations |
| BioProject |
PRJNA119671 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE17180_RAW.tar |
87.2 Mb |
(http)(custom) |
TAR (of CEL) |
| Processed data included within Sample table |
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