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Series GSE185009 Query DataSets for GSE185009
Status Public on Dec 10, 2021
Title Transcriptome analysis of IPSC and NPC, derived from twins, discordant by PD
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary This submission contains a result of a study of transcriptiomic profiles of the IPSC and NPC, derived from PD discordant monozygous twins.
 
Overall design Examination of transcriptiomic profiles of the IPSC and NPC, derived from PD discordant monozygous twins.
Two pairs of phenotypically and genetically monozygotic twins discordant for PD were enrolled in the study. These individuals (of Russian ethnic origin and residing in European Russia) were diagnosed at the State Public Health Institution Primorsk Regional Clinical Hospital No. 1 and did not have any family history of PD. The participants were assessed according to the International Parkinson and Movement Disorder Society-sponsored Unified Parkinson?s Disease Rating Scale and Hoehn?Yahr scores. The diagnosis of PD was based on the UK Parkinson?s Disease Society Brain Bank criteria. Patients were at stages 2?4 of the Hoehn?Yahr scale and had a mixed form of PD. The disease duration was at least 7 years. The healthy siblings did not have any signs of PD at the time of collection of the biological material. The twins lived in the same area, and their work was not associated with dangerous factors, such as pesticides or heavy metals. There was no information about the presence of head injuries in their history.
 
Contributor(s) Vlasov IN, Alieva AK, Novosadova EV, Arsenyeva EL, Rosinskaya AV, Partevian SA, Grivennikov IA, Shadrina MI
Citation(s) 34943986
Submission date Sep 29, 2021
Last update date Jan 07, 2022
Contact name Ivan Nikolaevitch Vlasov
E-mail(s) [email protected]
Organization name National Research Center «Kurchatov Institute»
Lab Laboratory of Molecular Genetics of Hereditary Disease
Street address Akademika Kurchatova square, 2
City Moscow
ZIP/Postal code 123182
Country Russia
 
Platforms (1)
GPL18460 Illumina HiSeq 1500 (Homo sapiens)
Samples (24)
GSM5603355 1K_IPSC_Slo19
GSM5603356 1B_IPSC_Slo1IPSK16
GSM5603357 1K_NPC_Slo22NP15
Relations
BioProject PRJNA767364
SRA SRP339306

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE185009_RAW.tar 75.6 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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