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Series GSE190070 Query DataSets for GSE190070
Status Public on Dec 06, 2021
Title An instructive role for Interleukin-7 receptor α in the development of human B-cell precursor leukemia
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Bulk RNAseq for transplanted transduced (CRLF2-IL7RAins or BB control)CB cells
 
Overall design Total RNA was purified from 5000-20000 transduced (CRLF2+ or GFP+) CD45+CD3- cells that were sorted from spleens of transplanted mice. cDNA libraries were prepared using SMARTer v3 kit (Clontech Laboratories, Inc. A Takara Bio Company, Mountain View, CA, USA) followed by the Nextera-XT indexing protocols (Illumina, CA, USA). Genome-wide expression profiles were obtained by sequencing of the samples on Illumina NextSeq 500 using NextSeq 500/550 High Output v2 kit. 
 
Contributor(s) Geron I, Brown J, Izraeli S, Enver T
Citation(s) 35115489
Submission date Dec 02, 2021
Last update date Feb 18, 2022
Contact name Dan Ben-Avraham
E-mail(s) [email protected]
Organization name Weizmann Institute of Science
Department Grand Israel National Center for Personalized Medicine
Lab Mantoux Institute for Bioinformnatics
Street address Hertzel 234
City Rehovot
ZIP/Postal code 7610001
Country Israel
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (11)
GSM5712803 BB-control for IG-2
GSM5712804 CRLF2 IL7RAins 1
GSM5712805 BB-control for IG-6
Relations
BioProject PRJNA785656

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190070_RNAseq_counts.xlsx 6.2 Mb (ftp)(http) XLSX
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Raw data are available in SRA
Processed data are available on Series record

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