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Series GSE190441 Query DataSets for GSE190441
Status Public on May 20, 2022
Title Transcriptional response to carbapenem treatment in Acinetobacter baumannii
Organism Acinetobacter baumannii
Experiment type Expression profiling by high throughput sequencing
Summary We report transcriptome sequencing analysis on A. baumannii strain ATCC 17978 cultures treated with or without meropnem at 0.5, 3 and 9 h, in triplicate.
 
Overall design Differential gene expression of genes in A. baumannii strain ATCC 17978 with meropnem treatment.
 
Contributor(s) Islam N, Kazi MI, Kang KN, Dörr T, Boll JM
Citation(s) 35638738
Submission date Dec 08, 2021
Last update date Jul 07, 2022
Contact name Joseph Michael Boll
Organization name University of Texas at Dallas
Department Biological Sciences
Lab BSB 12.302
Street address 800 W Campbell
City Richardson
State/province TX
ZIP/Postal code 75080
Country USA
 
Platforms (1)
GPL31042 NextSeq 550 (Acinetobacter baumannii)
Samples (18)
GSM5723825 30min_no_mero_1
GSM5723826 30min_no_mero_2
GSM5723827 30min_no_mero_3
Relations
BioProject PRJNA787205
SRA SRP349797

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE190441_Complete_Raw_gene_counts_matrix.txt.gz 246.1 Kb (ftp)(http) TXT
GSE190441_RAW.tar 2.2 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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