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Series GSE197329 Query DataSets for GSE197329
Status Public on Dec 31, 2022
Title scRNAseq of the PDAC tumors from autochtonous KPC mice treated with vehicle or IRAK4 inhibitor CA-4948
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary We treated 6 week-old KPC mice with vehicle or CA-4948 and perform scRNASeq to assess transcriptomic changes in CAFs and immune cells
 
Overall design scRNAseq analysis of CAFs and immune cells isolated from KPC tumors treated with vehicle or IRAK4 inhibitor
 
Contributor(s) Lim K, DeNardo DG
Citation(s) 35271824
Submission date Feb 23, 2022
Last update date Apr 01, 2023
Contact name Kian-Huat Lim
E-mail(s) [email protected]
Phone 3143627009
Organization name Washington University School of Medicine
Department Internal Medicine/Oncology
Street address 4566 Scott Avenue, Room 502
City St. Louis
State/province MO
ZIP/Postal code 63132
Country USA
 
Platforms (1)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (4)
GSM5914678 IRAK4i CAF
GSM5914679 IRAK4i Immune
GSM5914680 Vehicle CAF
Relations
BioProject PRJNA809751

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197329_RAW.tar 923.8 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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