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Series GSE197779 Query DataSets for GSE197779
Status Public on Nov 08, 2022
Title Highly efficient generation of blastocyst-like structures from mouse totipotent blastomere-like cells
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Mammalian embryogenesis begins with a totipotent zygote. Early embryogenesis can be recapitulated by aggregated extended pluripotent stem cells (EPSCs) in a 3D culture system. However, the efficiency of generating blastoids is low and whether other reported totipotent stem cells retained a similar capacity remains unknown. Here we show that spliceosomal repressed totipotent blastomere-like cells (TBLCs) form blastocyst-like structures when aggregated in 3D microwells with around 80% efficiency. TBLC-blastoids resemble blastocysts in morphology and cell-lineage allocation, show similar transcriptional profile with natural blastocysts and contain more TE cells and fewer undefined intermediate cells compared to blastoids from EPSCs. Moreover, TBLC-blastoids can develop beyond the implantation stage in vitro and induce decidualization after transferred into uterus. In summary, we supply an alternative cell type to generate ameliorated blastoids highly efficiently for studying early mouse embryogenesis.
 
Overall design RNA-seq were performed on mESCS and mCMG-TBLCs with mCMG ESCs in ES medium plus 2.5 nM PlaB on feeders for over 6 passages; scRNA-seq were performed on TBLC-blastoids.
 
Contributor(s) Zhang P, Zhai X, Huang B, Zhang M
Citation(s) 36633710
Submission date Mar 02, 2022
Last update date Apr 10, 2023
Contact name xuzhao zhai
E-mail(s) [email protected]
Organization name Guangzhou Laboratory
Street address Kaiyuan avenue
City Guangzhou
ZIP/Postal code 510000
Country China
 
Platforms (2)
GPL17021 Illumina HiSeq 2500 (Mus musculus)
GPL24247 Illumina NovaSeq 6000 (Mus musculus)
Samples (8)
GSM5930046 mCMG-TBLCs rep1
GSM5930047 mCMG-TBLCs rep2
GSM5930048 mCMG-TBLCs rep3
Relations
BioProject PRJNA812035

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE197779_SC-TBLCs-Blastoids.matrix.txt.gz 19.4 Mb (ftp)(http) TXT
GSE197779_mCMG_TBLCs-counts.matrix.txt.gz 364.6 Kb (ftp)(http) TXT
GSE197779_mESCs-counts.matrix.txt.gz 337.1 Kb (ftp)(http) TXT
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Raw data are available in SRA
Processed data are available on Series record

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