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| Status |
Public on Jul 26, 2022 |
| Title |
Methylome analysis of flowering branches building of Citrus plants induced by light drought (LD) condition [Bisulfite-Seq] |
| Organism |
Citrus unshiu |
| Experiment type |
Methylation profiling by high throughput sequencing
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| Summary |
The changes of golbal DNA methylation level are relative to phenotypes transition of plant, expecially during producetive growth program. Therefore, we detect the grolbal DNA methlation and transcription level of stems after LD treated and CK group to compare the DNA methylomes difference between CK and LD group.
The increase in DNA methylation level of LD group was correlated with decreased expression of DNA demethylase genes.There was a strong negative correlation between the genes expression level and methylation level of the flowering induction/flower development genes.
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| Overall design |
Globbal DNA methylation comparetive analysis of CK and LD group
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| Contributor(s) |
huang B, Wang P |
| Citation missing |
Has this study been published? Please login to update or notify GEO. |
| |
| Submission date |
May 13, 2022 |
| Last update date |
Jul 29, 2022 |
| Contact name |
Bei Huang |
| Organization name |
Zhejiang citrus research institute
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| Street address |
Daqiao street No.157
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| City |
Taizhou |
| State/province |
Zhejiang |
| ZIP/Postal code |
318026 |
| Country |
China |
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| Platforms (1) |
| GPL32252 |
Illumina NovaSeq 6000 (Citrus unshiu) |
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| Samples (2) |
| GSM6138595 |
Citrus unshiu-normal-shoots [Bisulfite-Seq] |
| GSM6138596 |
Citrus unshiu-light drought 75 d-shoots [Bisulfite-Seq] |
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| This SubSeries is part of SuperSeries: |
| GSE202927 |
Transcriptome and Methylome analysis of flowering branches building of Citrus plants induced by light drought (LD) condition |
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| Relations |
| BioProject |
PRJNA837761 |
