|
| Status |
Public on Jan 01, 2023 |
| Title |
Effect of S. epidermidis phenol-soluble modulins on primary human keratinocytes. |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
To investigate the effect of synthetic phenol-soluble modulins (PSMs) secreted by S. epidermidis on primary keratinocytes.
We then performed gene expression profiling analysis using data obtained from RNA-seq of 4 different cells at two time points.
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| |
|
| Overall design |
Comparative gene expression profiling analysis of RNA-seq data for 70% confluent neonatal prmary human epidermal keratinocytes (48h 2mM CaCl2 pre-differentiation ) followed by 6h synthetic 10uM PSM treatment.
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| |
|
| Contributor(s) |
Williams MR, Gallo RL |
| Citation(s) |
37610872 |
| |
| Submission date |
Jul 25, 2022 |
| Last update date |
Oct 26, 2023 |
| Contact name |
Michael R Williams |
| E-mail(s) |
[email protected]
|
| Organization name |
UC San Diego
|
| Department |
Dermatology
|
| Lab |
Richard L. Gallo
|
| Street address |
9500 Gilman Drive
|
| City |
La Jolla |
| State/province |
CA |
| ZIP/Postal code |
92093-0869 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL24676 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA861992 |
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