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Series GSE213751 Query DataSets for GSE213751
Status Public on Sep 22, 2022
Title CCL17 promotes colitis-associated tumorigenesis dependent on the microbiota
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary • CCL17 expression is increased in colitis-associated colon tumors
• Single-housed CCL17-deficient mice develop fewer tumors dependent on the microbiota
• Reduced tumor numbers coincide with increased apoptosis during tumor initiation
 
Overall design Sorted cells from tumors from CCL17 ko mice cohoused with control mice or CCL17 ko mice separately housed after AOM DSS treatment
 
Contributor(s) Metzger R, Öllinger R
Citation(s) 36426975
Submission date Sep 20, 2022
Last update date Jun 30, 2023
Contact name Rebecca Metzger
E-mail(s) [email protected]
Organization name LMU
Street address Großhaderner Strasse 9
City Planegg
ZIP/Postal code 82152
Country Germany
 
Platforms (1)
GPL19057 Illumina NextSeq 500 (Mus musculus)
Samples (48)
GSM6593425 Ly6Chi-MHCIIhi-ctrl-1-1
GSM6593426 Ly6Chi-MHCIIhi-ctrl-2-1
GSM6593427 Ly6Chi-MHCIIhi-ctrl-3-1
Relations
BioProject PRJNA882384

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE213751_113RM01_DGE_Matrix.txt.gz 639.3 Kb (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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