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Series GSE214693 Query DataSets for GSE214693
Status Public on Jul 13, 2023
Title IL-7 receptor signaling drives human B-cell precursor differentiation and expansion
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Whereas absence of interleukin 7 (IL-7) signaling completely abrogates T and B lymphopoiesis in mice, severe combined immunodeficiency patients with mutations in the IL-7 receptor α chain still generate peripheral blood B cells. Consequently, human B lymphopoiesis has been thought to be independent of IL-7 signaling. Using flow cytometric analysis and single-cell RNA sequencing of bone marrow samples of IL-7 receptor α chain-deficient patients and healthy controls in combination with in vitro modeling of human B-cell differentiation, we demonstrate that IL-7 receptor signaling has a crucial role in human B lymphopoiesis. IL-7 drives proliferation and expansion of early B-cell progenitors, but not of pre-BII large cells. In addition, IL-7 has a limited role in the prevention of cell death. Furthermore, IL-7 guides cell fate decisions by enhancing the expression of BACH2, EBF1, and PAX5, which jointly orchestrate specification and commitment of early B-cell progenitors. In line with this observation, early B-cell progenitors of IL-7Rα-deficient patients still expressed myeloid-specific genes. Collectively, our results unveil a thus-far unknown role for IL-7 signaling in promoting the B-lymphoid fate and expanding early human B-cell progenitors, while defining important differences between mice and humans. Our results have implications for hematopoietic stem cell transplantation strategies in patients with T- B+ severe combined immunodeficiency and provide insights into the role of IL-7 receptor signaling in leukemogenesis.
 
Overall design Sorted mononuclear cells from bone marrow of two healthy donors and two patients with IL7RA deficiency were stained with CITEseq antibodies (IL7RA, CD34, CD19 and IgM) and analyzed using scRNAseq
Web link https://ashpublications.org/blood/article/doi/10.1182/blood.2023019721/496603/IL-7-receptor-signaling-drives-human-B-cell?searchresult=1
 
Contributor(s) Kaiser F, Janowska I, Menafra R, de Gier M, Korzhenevich J, Pico-Knijnenburg I, Khatri I, Schulz A, Kuijpers T, Lankester A, Konstantinidis L, Erlacher M, Kloet S, van Schouwenburg P, Rizzi M, van der Burg M
Citation(s) 37369082
Submission date Oct 03, 2022
Last update date Jul 14, 2023
Contact name Mirjam van der Burg
E-mail(s) [email protected]
Phone +31647181911
Organization name LUMC
Street address Albinusdreef 2
City Leiden
ZIP/Postal code 2333 ZA Leiden
Country Netherlands
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (8)
GSM6614330 Control 1 GEX
GSM6614331 Control 2 GEX
GSM6614332 Patient 1 GEX
Relations
BioProject PRJNA886683

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Supplementary file Size Download File type/resource
GSE214693_RAW.tar 40.0 Mb (http)(custom) TAR (of MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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