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Series GSE22388 Query DataSets for GSE22388
Status Public on Dec 23, 2019
Title The stress response of Bradyrhizobium japonicum
Platform organism Bradyrhizobium diazoefficiens USDA 110
Sample organism Bradyrhizobium japonicum
Experiment type Expression profiling by array
Summary Expression data from B. japonicum stress response; aerobic treatment of B. japoncium culture under different stress conditons; pH stress (8 and 4; 4 h); salt stress (80 mM NaCl; 4 h); heat shock (43 °C; 15 min) and temperature stress (35.2 °C; 48 h); as reference wildtype without treatment (AG media; pH 6.9; without NaCl; 28 °C) was used
heat shock data were verified by using rpoH-mutant strains B. japonicum 5009; B. japonicum 5032 and B. japonicum 09-32 as described in Narberhaus et al. 1997
 
Overall design B. japonicum transcriptome was determined under different stress conditons
 
Contributor(s) Lang K, Pessi G, Göttfert M
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Submission date Jun 16, 2010
Last update date Dec 23, 2019
Contact name Hans-Martin Fischer
E-mail(s) [email protected]
Organization name ETH Zürich
Department Microbiology
Lab Prof. J. Vorholt
Street address Vladimir-Prelog-Weg 4
City Zürich
ZIP/Postal code CH-8093
Country Switzerland
 
Platforms (1)
GPL3401 Affymetrix custom Bradyrhizobium japonicum strain USDA 110 19K array
Samples (34)
GSM556914 heat shock basis klang_N15_28
GSM556915 heat shock basis klang_R15_28
GSM556916 heat shock basis klang_T15_28
Relations
BioProject PRJNA127741

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22388_RAW.tar 86.9 Mb (http)(custom) TAR (of CEL, CHP)
Processed data included within Sample table
Processed data provided as supplementary file
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