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Series GSE22828 Query DataSets for GSE22828
Status Public on Jul 01, 2011
Title Atlas of Gene Expression at Microanatomical Resolution of the Submandibular Salivary Gland
Organism Mus musculus
Experiment type Expression profiling by array
Summary The goal of this study was to generate a spatiotemporal atlas of gene expression in the developing salivary gland. This will allow us to identify changes in gene expression that may result in the formation of the different domains of the salivary gland.
 
Overall design At least 4 microarrays per location per time point were collected. The originating samples are rather small, so many clefts, ducts and buds had to be pooled to generate enough aRNA for hybridization.

Supplementary file: cluster heat map from anova 0.05 passing entities, E12.5 main bud vs E15 main bud (averaged readings)
 
Contributor(s) Musselmann K, Sone K, Bothwell I, Johnson S, Yamada K
Citation(s) 21709141
Submission date Jul 08, 2010
Last update date Jan 12, 2017
Contact name Kurt Musselmann
E-mail(s) [email protected]
Phone +13017607402
Organization name NIDCR
Department Laboratory of Cell and Developmental Biology
Lab Cell Biology Section
Street address 30 Convent Dr, Room 426
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL7202 Agilent-014868 Whole Mouse Genome Microarray 4x44K G4122F (Probe Name version)
Samples (84)
GSM564337 EmbryonicBud_Age12 rep 1
GSM564338 EmbryonicBud_Age12 rep 2
GSM564339 EmbryonicBud_Age12 rep 3
Relations
BioProject PRJNA127877

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22828_BPM66_AT.xls.gz 2.0 Mb (ftp)(http) XLS
GSE22828_E12.5_Fold_Change_Expression_Data.xlsx.gz 222.7 Kb (ftp)(http) XLSX
GSE22828_E125PM66_AT.xls.gz 870.6 Kb (ftp)(http) XLS
GSE22828_E13.5_Fold_Change_Expression_Data.xls.gz 223.4 Kb (ftp)(http) XLS
GSE22828_E135PM66_AT.xls.gz 1.4 Mb (ftp)(http) XLS
GSE22828_E14PM66_AT.xls.gz 491.5 Kb (ftp)(http) XLS
GSE22828_E14_Fold_Change_Expression_Data.xls.gz 77.3 Kb (ftp)(http) XLS
GSE22828_E15PM66_AT.xls.gz 1.5 Mb (ftp)(http) XLS
GSE22828_E15_Fold_Change_Expression_Data.xls.gz 256.0 Kb (ftp)(http) XLS
GSE22828_Kegg_Pathways_per_age_comparing_Buds_to_Ducts.xls.gz 26.0 Kb (ftp)(http) XLS
GSE22828_MDPM66_AT.xls.gz 2.5 Mb (ftp)(http) XLS
GSE22828_RAW.tar 761.2 Mb (http)(custom) TAR (of TXT)
GSE22828_e12vs_e15_heatmap_psd.tiff.gz 519.4 Kb (ftp)(http) TIFF
GSE22828_e14pm66_at.xls.gz 491.5 Kb (ftp)(http) XLS
GSE22828_readme.txt.gz 365 b (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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