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Series GSE22909 Query DataSets for GSE22909
Status Public on Jul 01, 2011
Title Influence of TCDD onto HCC cell line
Organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary HepG2 cell lines were treated with TCDD, as an activator for the TF AhR/arnt since it is a known ligand for AhR.
Hepatocellular carcinoma (HCC) is a fatal disease with currently very limited beneficial therapies. MicroRNAs (miRs), which are considered to be master regulators of gene expression, have significant influence on cellular pathways and phenotype, and are de-regulated in HCC, and hence are thought to be of great therapeutic potential as novel targets. We identified hsa-miR-191 as a potential target for HCC therapy. Inhibition of this miR causes decreased cell proliferation and induction of apoptosis in vitro as well as a significant reduction of tumor mass in vivo in an orthotopic liver xenograft model. This miR was also found to be up-regulated by a dioxin, a known liver carcinogen, and was found to be a key regulator of cancer related pathways.
 
Overall design HCC cell lines treated with TCDD and control. Although this experiment was done with dual channel, chanels are not compared, irrelevant samples were on the reciprocal channel. Sample data tables represent relevant, single channel data.
 
Contributor(s) Yerushalmi N, Elyakim E, Sitbon E, Dov A
Citation(s) 20924108
Submission date Jul 13, 2010
Last update date Mar 22, 2012
Contact name Einat Sitbon
Organization name Rosetta Genomics
Street address 10 Plaut St
City Rehovot
ZIP/Postal code 76706
Country Israel
 
Platforms (1)
GPL10676 Rosetta Genomics human miRNA array v34 (condensed)
Samples (2)
GSM565765 8071-control
GSM565766 8069-TCDD 48 h
This SubSeries is part of SuperSeries:
GSE22910 hsa-miR-191, a potential target for Hepatocellular carcinoma therapy
Relations
BioProject PRJNA129153

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22909_RAW.tar 550.0 Kb (http)(custom) TAR (of SRR)
Processed data included within Sample table

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