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Series GSE230344 Query DataSets for GSE230344
Status Public on Nov 22, 2023
Title FoxK1 Associated Gene Regulatory Network in Hepatic Insulin Action and It’s Relationship to FoxO and Insulin Receptor Mediated Transcriptional Regulation
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq analysis demonstrates FoxK1 binding to proximal promoters and enhancers, especially to genes containing a TGTTTAC motif, which is similar to the FoxA/FoxO motifs.
 
Overall design Examination of FoxK1 binding in basal and insulin-stimulated HepG2 cells (ChIP-seq).
 
Contributor(s) Allu P, Kahn CR
Citation(s) 37852413
Submission date Apr 22, 2023
Last update date Nov 23, 2023
Contact name Hui Pan
E-mail(s) [email protected]
Organization name Joslin Diabetes Center
Department Bioinformatics and Biostatistics Core
Street address 1 Joslin Place
City Boston
ZIP/Postal code 02215
Country USA
 
Platforms (1)
GPL24676 Illumina NovaSeq 6000 (Homo sapiens)
Samples (12)
GSM7220211 Insulin-FoxK1_1
GSM7220212 Insulin-FoxK1_2
GSM7220213 Insulin-FoxK1_3
Relations
BioProject PRJNA960643

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE230344_RAW.tar 1.2 Gb (http)(custom) TAR (of BIGWIG, NARROWPEAK)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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