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Series GSE237266 Query DataSets for GSE237266
Status Public on Apr 16, 2024
Title IL-7-primed bystander CD8 tumor-infiltrating lymphocytes optimize the antitumor efficacy of T-cell engager immunotherapy in solid tumors
Organism Mus musculus
Experiment type Expression profiling by high throughput sequencing
Summary Bispecific T-cell engagers (TCEs) show promising clinical efficacy in blood tumors, but their application to solid tumors with immunosuppressive environments remains challenging. Here, we show that Fc-fused IL-7 (rhIL-7-hyFc) changes the intratumoral CD8 T cell landscape, allowing TCE-immunotherapy to function effectively in solid tumors. In order to explore the transcriptomic changes induced by rhIL-7-hyFc or a combination of rhIL-7-hyFc and TCE treatment at the clonal level, we performed scRNA/TCR-seq.
 
Overall design Tumor-infiltrating CD8 T cells from mice bearing MC38 tumors were isolated following two treatment conditions: (1) treatment with either buffer or rhIL-7-hyFc, and (2) treatment with either rhIL-7-hyFc or a combination of rhIL-7-hyFc and TCE. For the enrichment of CD8 T cells, cells were isolated by positive selection methods with IMag (condition 1) or sorted by FACS (condition 2) after single-cell preparation. The purified CD8 T cells were analyzed by scRNA-seq paired with scTCR-seq.
 
Contributor(s) Lee K, Choi D, Tae N, Song HW, Park S, Kang Y, Moon D, Oh Y, Kim J, Hing D, Sohn J, Lee M, Im S, Park Y, Choi SS, Kim DH, Lee S
Citation(s) 38744277
Submission date Jul 13, 2023
Last update date Jun 26, 2024
Contact name Hawon Song
Organization name Kangwon National University
Street address Gangwon Daehak-gil 1
City Chuncheon
ZIP/Postal code 24341
Country South Korea
 
Platforms (1)
GPL21273 HiSeq X Ten (Mus musculus)
Samples (8)
GSM7598095 (1) Buffer [Gene Expression]
GSM7598096 (1) rhIL-7-hyFc [Gene Expression]
GSM7598097 (2) rhIL-7-hyFc [Gene Expression]
Relations
BioProject PRJNA994499

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE237266_RAW.tar 316.1 Mb (http)(custom) TAR (of CSV, MTX, TSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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