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| Status |
Public on Oct 18, 2010 |
| Title |
Canton S Ago1 Immunoprecipitation |
| Project |
modENCODE
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| Organism |
Drosophila melanogaster |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
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| Summary |
modENCODE_submission_2744
This submission comes from a modENCODE project of Eric Lai. For full list of modENCODE projects, see http://www.genome.gov/26524648
Project Goal: We plan to generate a comprehensive catalog of expressed and functional microRNAs, and generate biological evidence for their regulatory activity. We plan also to delineate the primary transcription units of microRNA genes. Finally, we plan to annotate other classes of non-miRNA expressed small RNAs, as least some of which may define novel classes of small RNA genes.
For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODEDataReleasePolicyFinal2008.pdf
Keywords: RIP-seq
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| Overall design |
EXPERIMENT TYPE: RIP-seq. BIOLOGICAL SOURCE: Strain: Canton S; Developmental Stage: Adult Female; Genotype: wild type; Sex: Female; EXPERIMENTAL FACTORS: Adult_ovaries
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| Web link |
http://www.modencode.org
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| Contributor(s) |
Lai E, Hannon G |
| Citation(s) |
21135122, 21177969 |
| BioProject |
PRJNA168994 |
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| Submission date |
Sep 23, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
DCC modENCODE |
| E-mail(s) |
[email protected]
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| Phone |
416-673-8579
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| Organization name |
Ontario Institute for Cancer Research
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| Lab |
modENCODE DCC
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| Street address |
MaRS Centre, South Tower, 101 College Street, Suite 800
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| City |
Toronto |
| State/province |
Ontario |
| ZIP/Postal code |
M5G 0A3 |
| Country |
Canada |
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| Platforms (1) |
| GPL9058 |
Illumina Genome Analyzer (Drosophila melanogaster) |
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| Samples (1) |
| GSM609230 |
Tissue:Adult_ovaries:EL:1 extraction1_seq1 aliquote 1_Ago1IP_2744 |
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| Relations |
| SRA |
SRP003842 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE24310_RAW.tar |
35.8 Mb |
(http)(custom) |
TAR (of SAM) |
SRA Run Selector |
| Processed data provided as supplementary file |
| Raw data are available in SRA |
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